Data quality metrics extracted from 6zyf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6ZYF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-02-27
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.92819
Software
Data reduction
_software.classification
xia2
Data scaling
_software.classification
xia2
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (1.18.2_3874)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
75.418 184.072 61.811 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.92819 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
92.040 2.230
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.190 2.190
  Rmerge - -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
45353 2207
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.30 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.7
Multiplicity
_reflns.pdbx_redundancy
6.1 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.990 0.530

Refinement
PDB entry ID
_entry.id
6ZYF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-07-31
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
92.0 - 2.190 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2310 / 0.2523
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4UZQ