Data quality metrics extracted from 2zir.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2ZIR at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PHOTON FACTORY BEAMLINE BL-6B
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Photon Factory
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL-6B
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
DIFFRACTOMETER
Collection date
_diffrn_detector.pdbx_collection_date
2001-06-05
Detector
_diffrn_detector.type
WEISSENBERG
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.000
Software
Data reduction
_software.classification
DENZO (1.9.0; Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling
_software.classification
SCALEPACK (1.9.0; Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Phasing
_software.classification
MOLREP (6.2.5; A. Vagin; alexei@ysbl.york.ac.uk)
Refinement
_software.classification
CNX (2000; Axel T. Brunger; axel.brunger@yale.edu)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
171.996 171.996 69.179 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
100.000 100.000 2.490
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.400 5.170 2.400
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.045 0.017 0.396
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
44027 4668 3926
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
21.80 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.9 98.6 86.2
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
2ZIR
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-02-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.0 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1950 / 0.2300
Structure solution method
_refine.pdbx_method_to_determine_struct
MR
Starting model
_refine.pdbx_starting_model
PDB ENTRY 1FPP