Data quality metrics extracted from 6zgp.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6ZGP at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I24
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I24
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-12-01
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91188
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
DIALS
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.14_3260)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
91.07 173.77 157.29 90.00 90.15 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91188 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
80.670 2.082
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.010 2.010
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.165 1.783
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.179 1.929
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.068 0.733
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
322879 32095
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
6.88 1.13
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.4 99.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.9 6.8
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.698

Refinement
PDB entry ID
_entry.id
6ZGP
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-06-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
80.7 - 2.010 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2139 / 0.2546
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6Y9D