Data quality metrics extracted from 4zgf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4ZGF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL14-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL14-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-02-12
Detector
_diffrn_detector.type
MARMOSAIC 325 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.95369,0.97946,0.9793
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (November 3, 2014 BUILT=20141118)
Phasing #1
_software.classification
SHELX
Phasing #2
_software.classification
SHARP
Phasing #3
_software.classification
SHELXD
Refinement
_software.classification
REFMAC (5.8.0107)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
31.747 55.486 76.176 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.953690.979460.97930 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.304 29.304 1.040
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.000 2.150 1.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.038 0.015 0.644
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.050 0.021 0.851
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
281103 29443 28050
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
72996 13799 14545
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
12.26 42.40 1.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.2 97.3 93.4
Multiplicity
_reflns.pdbx_redundancy
2.0 - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4ZGF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-04-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.3 - 1.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1160 / 0.1365
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD