Data quality metrics extracted from 4zem.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4ZEM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-11-12
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.918410
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER (2.3.0)
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
138.00 138.00 146.64 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91841 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.630
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.540 50.000 2.540
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.050 - 0.584
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.058 - 0.677
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
134799 - 14846
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
34537 - 3801
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
23.71 - 2.62
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 - 99.9
Multiplicity
_reflns.pdbx_redundancy
3.9 - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4ZEM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-04-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.5 - 2.550 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1757 / 0.2038
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
The N-terminal domain (res. 34-134) of chain A in PDB entry 2YVK and the C-terminal domain (res. 107-305) of chain B in entry 3ECS were used.