Data quality metrics extracted from 6zdq.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.

Experimental information for 6ZDQ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL19U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL19U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-06-09
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.978520
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
autoPROC
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
PHENIX (1.18.2_3874)
Refinement #2
_software.classification
PHENIX (1.18.2_3874)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
74.156 74.156 451.418 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97852 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å] 
_reflns.d_resolution_low _reflns_shell.d_res_low
 31.450 3.091
High resolution limit [Å] 
_reflns.d_resolution_high _reflns_shell.d_res_high
 2.980 2.984
Rmerge 
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
 0.069 1.030
Rmeas 
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
 0.072 1.074
Rpim 
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
 0.021 0.303
  Total number of observations - -
Total number unique 
_reflns.number_obs _reflns_shell.number_unique_obs
 25498 2662
<I/σ(I)> 
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
 26.31 2.68
Completeness [%] 
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
 93.6 99.4
Multiplicity 
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
 12.6 12.4
CC(1/2) 
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
 0.997 0.937

Refinement
PDB entry ID
_entry.id
6ZDQ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-06-15
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
31.4 - 2.980 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2384 / 0.2920
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD