Data quality metrics extracted from 6zb8.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6ZB8 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
MAX IV BEAMLINE BioMAX
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
MAX IV
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BioMAX
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-03-27
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.826561
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.15.2_3472: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
55.63 87.79 70.86 90.00 100.96 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.82656 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.350 1.400
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.350 1.350
Rmerge
_reflns.pdbx_Rsym_value
0.084 -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
139214 10636
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.20 1.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.2 70.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.6 5.0
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.997 0.373

Refinement
PDB entry ID
_entry.id
6ZB8
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-06-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.4 - 1.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1528 / 0.1625
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS
Starting model
_refine.pdbx_starting_model
Wild-type structure solved by MR-SAD