Data quality metrics extracted from 4z7f.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4Z7F at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL17U
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL17U
Temperature [K]
_diffrn.ambient_temp
77.15
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-07-08
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9793
Software
Data scaling
_software.classification
HKL-2000
Refinement
_software.classification
PHENIX (phenix.refine: 1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 31
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
92.752 92.752 183.445 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97930 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
40.000 40.000 3.310
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.194 6.880 3.200
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.138 - 0.976
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.150 - 0.738
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.093 0.036 0.855
Total number of observations
_reflns.pdbx_number_measured_all
101633 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
28978 2813 2902
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.30 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.3 94.8 99.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.5 3.2 3.5
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.995 0.820

Refinement
PDB entry ID
_entry.id
4Z7F
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-04-07
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
33.6 - 3.194 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2934 / 0.3564
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4HUQ