Data quality metrics extracted from 5z6v.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5Z6V at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
PAL/PLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
7A (6B, 6C1)
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-09-27
Detector
_diffrn_detector.type
ADSC QUANTUM 270
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9794
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
AutoSol
Refinement
_software.classification
REFMAC (5.8.0158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
63.900 63.320 34.666 90.00 97.22 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97940 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 1.930
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.870 1.900
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.133 0.381
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.145 0.410
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.057 0.150
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
10741 530
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
48.38 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.0 97.8
Multiplicity
_reflns.pdbx_redundancy
6.6 -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5Z6V
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2018-01-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
44.8 - 1.870 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1538 / 0.1984
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD