Data quality metrics extracted from 6z5a.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6Z5A at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04-1
Temperature [K]
_diffrn.ambient_temp
100.0
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2012-07-13
Detector
_diffrn_detector.type
DECTRIS PILATUS3 2M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9200
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
SCALA (3.3.20)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.6.0117)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
77.84 78.29 83.19 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.92000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
57.013 34.972 1.630
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.550 4.900 1.550
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.093 0.045 0.699
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.104 0.050 0.780
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.046 0.022 0.340
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
74138 2560 10720
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.00 13.60 2.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 99.7 99.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.0 5.3 5.1
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
6Z5A
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-05-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
35.0 - 1.550 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1559 / 0.1822
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4qtc