Data quality metrics extracted from 4z5v.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4Z5V at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL17U
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL17U
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-12-14
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97907
Software
Data processing
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX (1.8.2-1309)
Refinement
_software.classification
PHENIX (1.8.2_1309)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
101.042 101.042 165.806 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97907 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 3.160
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.050 3.050
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.761
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.089 0.903
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.023 0.223
Total number of observations
_reflns.pdbx_number_measured_all
274550 -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
31292 1752
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
20.60 3.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 96.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.6 8.5
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.899

Refinement
PDB entry ID
_entry.id
4Z5V
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-04-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.5 - 3.049 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2262 / 0.2660
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD