Data quality metrics extracted from 2z5c.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2Z5C at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL44XU
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL44XU
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2007-04-08
Detector
_diffrn_detector.type
Bruker DIP-6040
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9000
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.2.0019)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
158.687 159.181 65.035 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.90000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.380 3.000
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.900 2.900
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.080 0.350
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
37091 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
20.00 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 99.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.3 6.4
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2Z5C
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2007-07-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.4 - 2.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2496 / 0.2833
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 2Z5B; PDB ENTRY 1RYP chain E