Data quality metrics extracted from 1yvs.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1YVS at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SRS BEAMLINE PX7.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SRS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PX7.2
Temperature [K]
_diffrn.ambient_temp
287
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
1996-08
Detector
_diffrn_detector.type
MARRESEARCH
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
CCP4
Phasing
_software.classification
X-PLOR (3.1)
Model building
_software.classification
X-PLOR (3.1)
Refinement
_software.classification
X-PLOR (3.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
70.08 70.08 162.55 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.48800 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.900
High resolution limit [Å]
_reflns.d_resolution_high
2.200
Rmerge
_reflns.pdbx_Rsym_value
0.069
  Rmeas -
  Rpim -
  Total number of observations -
  Total number unique -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
17.00
Completeness [%]
_reflns.percent_possible_obs
98.0
Multiplicity
_reflns.pdbx_redundancy
22.0
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
1YVS
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
1998-12-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
15.0 - 2.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1870 / 0.2440
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1BRN