Data quality metrics extracted from 7yqb.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7YQB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL19U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL19U1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-05-11
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97918
Software
Refinement
_software.classification
PHENIX (1.15.2_3472)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
62.444 94.777 109.010 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97918 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 1.760
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.700
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.100 -
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
71255 66173
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
24.84 -
Completeness [%]
_reflns.percent_possible_obs
92.7 -
Multiplicity
_reflns.pdbx_redundancy
10.9 -
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.100

Refinement
PDB entry ID
_entry.id
7YQB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-08-05
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.4 - 1.704 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1725 / 0.1943
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4RLZ