Data quality metrics extracted from 4yqt.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4YQT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-F
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-F
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-04-07
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97872
Software
Data collection
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
93.848 93.848 178.068 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97872 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.660
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.600 3.450 1.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.060 0.035 0.357
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
263697 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
39227 4137 3246
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.9 99.1 81.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.7 7.2 3.7
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4YQT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-03-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.6 - 1.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1750 / 0.2057
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1P9P