Data quality metrics extracted from 1yqh.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1YQH at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-BM
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-BM
Temperature [K]
_diffrn.ambient_temp
115
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2004-08-22
Detector
_diffrn_detector.type
CUSTOM-MADE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97931,0.97947
Software
Data collection
_software.classification
SBC-Collect
Data scaling
_software.classification
SCALEPACK
Phasing #1
_software.classification
SHELXD
Phasing #2
_software.classification
MLPHARE
Model building
_software.classification
ARP/wARP
Refinement
_software.classification
REFMAC (5.2.0005)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
76.716 55.175 49.875 90.00 120.39 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979310.97947 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
43.000 1.790
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.700 1.720
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.121
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
18421 -
<I/σ(I)>
_reflns_shell.meanI_over_sigI_obs
- 5.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
92.7 59.2
  Multiplicity - -
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1YQH
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2005-02-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.0 - 1.700 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1620 / 0.2006
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD