Data quality metrics extracted from mmCIF - (by aB_cif2table1 from BUSTER, Global Phasing Ltd.)

Data quality metrics extracted from 2ypn.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.

Experimental information for 2YPN at RCSB, PDBe, PDBj

Experiment
Method _exptl.method	X-RAY DIFFRACTION
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol	LAUE
Source type _diffrn_source.source	SYNCHROTRON
Source details _diffrn_source.type	ESRF BEAMLINE ID09
Synchrotron site _diffrn_source.pdbx_synchrotron_site	ESRF
Beamline _diffrn_source.pdbx_synchrotron_beamline	ID09
Temperature [K] _diffrn.ambient_temp	293
Detector technology _diffrn_detector.detector	CCD
Collection date _diffrn_detector.pdbx_collection_date	1995-11-15
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list	0.4,1.6
Software
Data collection _software.classification	DARESBURY (LAUE SUITE)
Data reduction #1 _software.classification	LAUENORM/AGROVATA
Data reduction #2 _software.classification	DARESBURY (LAUE SUITE)
Data scaling #1 _software.classification	LAUENORM
Data scaling #2 _software.classification	CCP4 (AGROVATA)
Phasing _software.classification	X-PLOR
Model building #1 _software.classification	X-PLOR
Model building #2 _software.classification	O
Refinement _software.classification	X-PLOR (3.1F)
General information
Spacegroup name _symmetry.space_group_name_H-M	P 21 21 2
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}	88.06 75.73 50.35 90.0 90.0 90.0
Wavelength _diffrn_radiation_wavelength.wavelength	0.40000 1.60000 Å

Data quality metrics	Overall
Low resolution limit [Å] _reflns.d_resolution_low	18.500
High resolution limit [Å] _reflns.d_resolution_high	2.300
Rmerge _reflns.pdbx_Rmerge_I_obs	0.102
Rmeas	-
Rpim	-
Total number of observations	-
Total number unique _reflns.number_obs	13949
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI	5.90
Completeness [%] _reflns.percent_possible_obs	89.8
Multiplicity _reflns.pdbx_redundancy	11.0
CC(1/2)	-

Refinement
PDB entry ID _entry.id	2YPN
Deposition date _pdbx_database_status.recvd_initial_deposition_date	1999-01-11
Resolution _refine.ls_d_res_low _refine.ls_d_res_high	18.5 - 2.300 Å
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free	0.1940 / 0.2690
Structure solution method _refine.pdbx_method_to_determine_struct	MOLECULAR REPLACEMENT
Starting model (for MR) _refine.pdbx_starting_model	PDB ENTRY 1AH5