Data quality metrics extracted from 4yop.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4YOP at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
FREE ELECTRON LASER
Source details
_diffrn_source.type
SACLA BEAMLINE BL3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SACLA
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL3
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-01-30
Detector
_diffrn_detector.type
MPCCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.77
Software
Phasing
_software.classification
SHELXDE
Refinement
_software.classification
PHENIX (phenix.refine: 1.8.4_1496)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
79.2 79.2 37.9 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.77000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
40.000
High resolution limit [Å]
_reflns.d_resolution_high
2.100
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
15532
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
24.90
Completeness [%]
_reflns.percent_possible_obs
100.0
Multiplicity
_reflns.pdbx_redundancy
1119.0
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4YOP
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-03-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
28.0 - 2.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1573 / 0.1914