Data quality metrics extracted from 4yoo.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4YOO at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.1
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-01-25
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.984
Software
Data reduction
_software.classification
iMOSFLM
Data scaling #1
_software.classification
SCALA
Data scaling #2
_software.classification
Aimless
Refinement
_software.classification
PHENIX (phenix.refine: 1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
74.815 100.530 142.790 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98400 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
71.400
High resolution limit [Å]
_reflns.d_resolution_high
2.400
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
21369
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.60
Completeness [%]
_reflns.percent_possible_obs
99.3
Multiplicity
_reflns.pdbx_redundancy
5.2
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4YOO
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-03-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
71.4 - 2.400 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1954 / 0.2421
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given