Data quality metrics extracted from 4yob.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4YOB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-D
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-05-08
Detector
_diffrn_detector.type
RAYONIX MX-300
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.978
Software
Refinement
_software.classification
PHENIX (phenix.refine: 1.8.4_1496)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.754 45.754 102.220 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97800 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
102.220
High resolution limit [Å]
_reflns.d_resolution_high
1.500
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
17812
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
34.40
Completeness [%]
_reflns.percent_possible_obs
99.1
Multiplicity
_reflns.pdbx_redundancy
14.1
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4YOB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-03-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
27.3 - 1.504 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1760 / 0.1943
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given