Data quality metrics extracted from 2yoi.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2YOI at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-07-04
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA
Phasing
_software.classification
MOLREP
Refinement
_software.classification
PHENIX (PHENIX.REFINE)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
58.366 47.772 73.836 90.00 98.49 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97300 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
36.600 1.370
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.300 1.300
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.050 0.070
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
46574 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
18.40 7.90
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.4 89.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.0 1.8
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2YOI
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-10-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
25.6 - 1.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1560 / 0.1844
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 2TRX