Data quality metrics extracted from 2yk0.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2YK0 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SOLEIL BEAMLINE PROXIMA 1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SOLEIL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
PROXIMA 1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-05-22
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA
Phasing
_software.classification
AMoRE
Refinement
_software.classification
BUSTER (2.9.3)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
157.907 144.362 75.836 90.00 102.89 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98010 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
40.000 2.850
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.800 2.800
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.250 1.000
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
39458 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
6.90 0.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.9 84.7
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.4 4.7
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2YK0
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-05-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
40.2 - 2.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2127 / 0.2547
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 2XU0