Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | SEALED TUBE The general class of the radiation source. |
Source details _diffrn_source.type | OTHER The make, model or name of the source of radiation. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2013-09-24 The date of data collection. |
Detector _diffrn_detector.type | AGILENT TITAN CCD The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.54056 Comma separated list of wavelengths or wavelength range. |
Software | |
Data reduction _software.classification | Aimless The classification of the program according to its |
Data scaling _software.classification | Aimless (0.2.8) The classification of the program according to its |
Phasing _software.classification | MOLREP The classification of the program according to its |
Refinement _software.classification | REFMAC (5.7.0029) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 63 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 102.354 Unit-cell length a corresponding to the structure reported in 102.354 Unit-cell length b corresponding to the structure reported in 109.021 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 120.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.54056 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
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Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 19.340 The largest value in angstroms for the interplanar spacings | 19.340 The highest value in angstroms for the interplanar spacings | 2.830 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.700 The smallest value in angstroms for the interplanar spacings | 8.960 The smallest value in angstroms for the interplanar spacings | 2.700 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.132 The R value for merging intensities satisfying the observed | 0.045 The value of Rmerge(I) for reflections classified as 'observed' | 0.421 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas | - | - | - |
Rpim _reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all | 0.058 The precision-indicating merging R factor value Rpim, | 0.015 The precision-indicating merging R factor value Rpim, | 0.238 The precision-indicating merging R factor value Rpim, |
Total number of observations _reflns.pdbx_number_measured_all _reflns_shell.number_measured_all | 109336 Total number of measured reflections. | 4226 The total number of reflections measured for this | 9508 The total number of reflections measured for this |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 17802 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 456 The total number of measured reflections which are symmetry- | 2372 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 12.00 The mean of the ratio of the intensities to their | 42.40 The ratio of the mean of the intensities of the reflections | 3.30 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 99.7 The percentage of geometrically possible reflections represented | 89.6 The percentage of geometrically possible reflections represented | 100.0 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 6.1 Overall redundancy for this data set. | 9.3 Redundancy for the current shell. | 4.0 Redundancy for the current shell. |
CC(1/2) _reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half | 0.990 The Pearson's correlation coefficient expressed as a decimal value | 0.999 The Pearson's correlation coefficient expressed as a decimal value | 0.822 The Pearson's correlation coefficient expressed as a decimal value |
Refinement | |
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PDB entry ID _entry.id | 4YJJ |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2015-03-03 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 18.0 - 2.700 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.2075 / 0.2579 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | WARNING: no starting model (for MR) given |