Data quality metrics extracted from 1yft.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1YFT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL11-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL11-1
Temperature [K]
_diffrn.ambient_temp
200
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2004-07-16
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.82653
Software
Data collection
_software.classification
Blu-Ice
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
CNS
Refinement
_software.classification
CNS
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
73.912 73.912 172.905 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.82653 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.330
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.230 2.230
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.083 0.440
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
24100 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
12.00 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.4 5.4
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1YFT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2005-01-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
50.0 - 2.230 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2070 / 0.2390
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS
Starting model
_refine.pdbx_starting_model
1RIQ