Data quality metrics extracted from 1yfg.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1YFG at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PHOTON FACTORY
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Photon Factory
Temperature [K]
_diffrn.ambient_temp
278.00
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
1988-01-01
Detector
_diffrn_detector.type
Y.AMEMIYA
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Phasing #1
_software.classification
MLPHARE
Phasing #2
_software.classification
DM
Model building #1
_software.classification
PHARE
Model building #2
_software.classification
DENMOD
Refinement #1
_software.classification
NUCLIN/PROFFT
Refinement #2
_software.classification
MODIFIED (BY Z.OTWINOWSKI)
Refinement #3
_software.classification
NUCLIN
Refinement #4
_software.classification
PROFFT (MODIFIED BY Z.OTWINOWSKI)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 64 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
113.720 113.720 136.541 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
NA

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
20.000
High resolution limit [Å]
_reflns.d_resolution_high
3.000
Rmerge
_reflns.pdbx_Rsym_value
0.080
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
10688
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
15.70
Completeness [%]
_reflns.percent_possible_obs
95.0
  Multiplicity -
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
1YFG
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
1997-05-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
10.0 - 3.000 Å
Structure solution method
_refine.pdbx_method_to_determine_struct
MIR
Starting model
_refine.pdbx_starting_model
4 A STRUCTURE REPORTED IN REFERENCE 2