Data quality metrics extracted from 2y8i.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2Y8I at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-01-28
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
AMoRE
Refinement
_software.classification
PHENIX (PHENIX.REFINE)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 2 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
55.0 105.8 180.5 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91750 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
20.220
High resolution limit [Å]
_reflns.d_resolution_high
3.130
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.170
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
20093
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.23
Completeness [%]
_reflns.percent_possible_obs
96.4
Multiplicity
_reflns.pdbx_redundancy
11.1
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
2Y8I
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-02-07
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.2 - 3.132 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2447 / 0.3365
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1MMD