Data quality metrics extracted from 5y7t.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5Y7T at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSRRC BEAMLINE BL15A1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSRRC
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL15A1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2017-07-27
Detector
_diffrn_detector.type
RAYONIX MX300HE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data scaling
_software.classification
HKL-2000
Refinement
_software.classification
PHENIX (1.10.1_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
73.471 118.619 66.427 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 2.120
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.050 2.050
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.pdbx_Rsym_value
0.041 0.342
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
17776 17776
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
18.00 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.8 95.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.0 4.0
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.889

Refinement
PDB entry ID
_entry.id
5Y7T
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-08-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
28.3 - 2.050 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1985 / 0.2377