Data quality metrics extracted from 5y6i.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5Y6I at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NFPSS BEAMLINE BL18U
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NFPSS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL18U
Temperature [K]
_diffrn.ambient_temp
77
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-01-25
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9778
Software
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10.1_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
60.129 80.520 116.755 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97780 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
50.000
High resolution limit [Å]
_reflns.d_resolution_high
2.500
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
19620
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
27.20
Completeness [%]
_reflns.percent_possible_obs
99.0
Multiplicity
_reflns.pdbx_redundancy
12.8
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5Y6I
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-08-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.2 - 2.517 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2370 / 0.2954