Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | SYNCHROTRON The general class of the radiation source. |
Source details _diffrn_source.type | ESRF BEAMLINE BM14 The make, model or name of the source of radiation. |
Synchrotron site _diffrn_source.pdbx_synchrotron_site | ESRF Synchrotron site. |
Beamline _diffrn_source.pdbx_synchrotron_beamline | BM14 Synchrotron beamline. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2013-09-28 The date of data collection. |
Detector _diffrn_detector.type | MARMOSAIC 225 mm CCD The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.2819 Comma separated list of wavelengths or wavelength range. |
Software | |
Data reduction _software.classification | MOSFLM The classification of the program according to its |
Data scaling _software.classification | SCALA (3.3.20) The classification of the program according to its |
Phasing _software.classification | PHASER The classification of the program according to its |
Refinement _software.classification | REFMAC (5.8.0049) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | C 1 2 1 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 91.58 Unit-cell length a corresponding to the structure reported in 74.67 Unit-cell length b corresponding to the structure reported in 85.50 Unit-cell length c corresponding to the structure reported in 90.00 Unit-cell angle alpha of the reported structure in degrees. 123.73 Unit-cell angle beta of the reported structure in degrees. 90.00 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.28190 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
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Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 71.107 The largest value in angstroms for the interplanar spacings | 28.933 The highest value in angstroms for the interplanar spacings | 2.210 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.100 The smallest value in angstroms for the interplanar spacings | 6.640 The smallest value in angstroms for the interplanar spacings | 2.100 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs | 0.067 The R sym value as a decimal number. | 0.034 The value of Rmerge(I) for reflections classified as 'observed' | 0.478 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns.pdbx_Rrim_I_all | 0.077 The redundancy-independent merging R factor value Rrim, | - | - |
Rpim _reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all | 0.038 The precision-indicating merging R factor value Rpim, | 0.019 The precision-indicating merging R factor value Rpim, | 0.273 The precision-indicating merging R factor value Rpim, |
Total number of observations _reflns.pdbx_number_measured_all _reflns_shell.number_measured_all | 114040 Total number of measured reflections. | 3623 The total number of reflections measured for this | 16083 The total number of reflections measured for this |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 27988 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 909 The total number of measured reflections which are symmetry- | 4030 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 13.10 The mean of the ratio of the intensities to their | 15.10 The ratio of the mean of the intensities of the reflections | 3.00 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 99.8 The percentage of geometrically possible reflections represented | 99.0 The percentage of geometrically possible reflections represented | 99.5 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 4.1 Overall redundancy for this data set. | 4.0 Redundancy for the current shell. | 4.0 Redundancy for the current shell. |
CC(1/2) | - | - | - |
Refinement | |
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PDB entry ID _entry.id | 4Y6X |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2015-02-13 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 28.9 - 2.100 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1780 / 0.2296 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | 4Y6T |