Data quality metrics extracted from 4y40.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4Y40 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-05-31
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.91841
Software
Data reduction
_software.classification
XDS (November 11, 2013)
Data scaling #1
_software.classification
XSCALE (November 11, 2013)
Data scaling #2
_software.classification
Aimless (0.1.27)
Phasing
_software.classification
REFMAC (5.7.0029)
Refinement
_software.classification
BUSTER (2.10.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
133.495 152.340 61.611 90.00 97.05 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91841 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.690
High resolution limit [Å]
_reflns.d_resolution_high
2.200
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.145
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
61535
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.90
Completeness [%]
_reflns.percent_possible_obs
99.6
Multiplicity
_reflns.pdbx_redundancy
5.6
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4Y40
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-02-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.7 - 2.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1801 / 0.2058
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4IF8