Data quality metrics extracted from 1y3n.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1Y3N at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL44XU
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL44XU
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2002-03-02
Detector
_diffrn_detector.type
OXFORD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9
Software
Data scaling
_software.classification
d*TREK
Phasing
_software.classification
CNS
Refinement
_software.classification
CNS (1.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
58.434 67.788 62.811 90.00 95.31 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.90000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
40.760
High resolution limit [Å]
_reflns.d_resolution_high
1.600
Rmerge
_reflns.pdbx_Rsym_value
0.094
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
63420
  <I/σ(I)> -
Completeness [%]
_reflns.percent_possible_obs
99.5
  Multiplicity -
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
1Y3N
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2004-11-26
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
14.9 - 1.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1970 / 0.2240
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
AlgQ2, 1KWH