Data quality metrics extracted from 6y2i.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6Y2I at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-01-16
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.917
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Refinement
_software.classification
REFMAC (5.8.0257)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 31
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
75.314 75.314 149.230 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91700 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
74.610 2.380
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.530 1.530
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.040 0.389
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
141366 22883
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
16.80 2.80
Completeness [%]
_reflns.percent_possible_obs
99.4 -
Multiplicity
_reflns.pdbx_redundancy
4.2 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.882

Refinement
PDB entry ID
_entry.id
6Y2I
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-02-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
65.2 - 1.533 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1221 / 0.1357
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS