Data quality metrics extracted from 8xxe.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8XXE at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL10U2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL10U2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-01-07
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XDS
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0411)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
109.91 109.91 265.09 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
34.460 2.130
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.080 2.080
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.181 1.313
Rmeas
_reflns.pdbx_Rrim_I_all
0.189 -
Rpim
_reflns_shell.pdbx_Rpim_I_all
- 0.363
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
98252 7160
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
19.30 -
Completeness [%]
_reflns.percent_possible_obs
100.0 -
Multiplicity
_reflns.pdbx_redundancy
25.7 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.896

Refinement
PDB entry ID
_entry.id
8XXE
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-01-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.5 - 2.080 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1710 / 0.2167
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given