Data quality metrics extracted from 4xvy.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4XVY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-D
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-03-11
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0332
Software
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
DENZO
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0073)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
50.057 89.892 127.655 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.03320 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
43.730
High resolution limit [Å]
_reflns.d_resolution_high
2.400
Rmerge
_reflns.pdbx_Rsym_value
0.114
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
22837
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
15.10
Completeness [%]
_reflns.percent_possible_obs
98.4
Multiplicity
_reflns.pdbx_redundancy
6.4
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4XVY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-01-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.7 - 2.420 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2063 / 0.2581
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4XVZ