Data quality metrics extracted from 5xtu.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5XTU at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2016-07-22
Detector
_diffrn_detector.type
RIGAKU
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data collection
_software.classification
HKL-2000
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.8.0135)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
49.182 66.461 105.468 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
56.230 1.430
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.380 1.380
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.070 0.193
  Rmeas - -
Rpim
_reflns.pdbx_Rpim_I_all
0.070 -
  Total number of observations - -
Total number unique
_reflns.number_obs
70491 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
25.00 5.70
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.2 95.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.0 2.0
CC(1/2)
_reflns.pdbx_CC_half
0.912 -

Refinement
PDB entry ID
_entry.id
5XTU
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-06-21
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
56.2 - 1.380 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1579 / 0.1790
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD