Data quality metrics extracted from 4xtp.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4XTP at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID29
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID29
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-12-13
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.915
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
SCALA (3.3.21)
Phasing
_software.classification
PHASER
Model building
_software.classification
Coot
Refinement
_software.classification
REFMAC (5.8.0049)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 2 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
56.093 86.024 128.877 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91500 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
71.550 46.986 2.070
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.968 6.220 1.970
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.112 0.036 0.521
Rmeas
_reflns.pdbx_Rrim_I_all
0.122 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.049 0.016 0.229
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
136723 4644 15942
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
22033 797 2762
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.00 15.30 1.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.7 99.8 85.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.2 5.8 5.8
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4XTP
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-01-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
71.5 - 1.970 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1979 / 0.2544
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4U2A