Data quality metrics extracted from 4xrb.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4XRB at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2013-07-25
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97915
Software
Data collection
_software.classification
SBC-Collect
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
MOLREP
Refinement #1
_software.classification
PHENIX (phenix.refine: 1.8.2_1309)
Refinement #2
_software.classification
REFMAC
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
71.355 96.608 75.525 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97915 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.930
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.900 5.160 1.900
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.045 0.034 0.290
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.049 0.037 0.312
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.019 0.015 0.116
Total number of observations
_reflns.pdbx_number_measured_all
149934 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
21013 1035 1044
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
15.80 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.3 89.5 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.1 6.1 7.3
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.998 0.961

Refinement
PDB entry ID
_entry.id
4XRB
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-01-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
27.4 - 1.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1756 / 0.2005
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2p4g