Data quality metrics extracted from 6xnl.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6XNL at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 4.2.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
4.2.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CMOS
Collection date
_diffrn_detector.pdbx_collection_date
2018-01-09
Detector
_diffrn_detector.type
RDI CMOS_8M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.83
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.16_3549)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
59.069 34.848 46.712 90.000 100.444 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
0.83000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.850
High resolution limit [Å]
_reflns.d_resolution_high
2.200
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.071
Rmeas
_reflns.pdbx_Rrim_I_all
0.100
Rpim
_reflns.pdbx_Rpim_I_all
0.071
  Total number of observations -
Total number unique
_reflns.number_obs
8716
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
14.32
Completeness [%]
_reflns.percent_possible_obs
97.9
Multiplicity
_reflns.pdbx_redundancy
1.8
CC(1/2)
_reflns.pdbx_CC_half
0.986

Refinement
PDB entry ID
_entry.id
6XNL
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2020-07-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.9 - 2.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2219 / 0.3211
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1SWI