Data quality metrics extracted from 5xn6.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5XN6 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL17B1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL17B1
Temperature [K]
_diffrn.ambient_temp
77
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-09-10
Detector
_diffrn_detector.type
CS-PAD CXI-1
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9798
Software
Data collection
_software.classification
HKL-2000
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
HKL-2000
Data reduction #3
_software.classification
HKL-2000
Data reduction #4
_software.classification
HKL-2000
Data reduction #5
_software.classification
HKL-2000
Data reduction #6
_software.classification
HKL
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
103.062 102.981 103.486 109.39 109.59 109.13
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97980 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
37.800
High resolution limit [Å]
_reflns.d_resolution_high
3.590
  Rmerge -
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
36920
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.26
Completeness [%]
_reflns.percent_possible_obs
96.9
Multiplicity
_reflns.pdbx_redundancy
1.9
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5XN6
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-05-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.8 - 3.598 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2519 / 0.2633
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5E8H