Data quality metrics extracted from 4xje.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4XJE at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
93
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-07-11
Detector
_diffrn_detector.type
RIGAKU SATURN 944+
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.541780
Software
Data collection
_software.classification
StructureStudio (2.2.1)
Data reduction
_software.classification
xia2 (0.3.7.0)
Data scaling #1
_software.classification
XDS
Data scaling #2
_software.classification
XSCALE
Phasing
_software.classification
SHELX (2013)
Refinement
_software.classification
PHENIX (1.9-1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
42.02 42.02 191.98 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54178 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.990 47.990 1.930
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.880 8.410 1.880
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.056 0.018 0.511
  Rmeas - - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.010 0.003 0.139
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
469871 7339 13702
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
14841 213 1032
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
53.50 184.70 5.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.5 99.9 97.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
31.7 34.5 13.3
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4XJE
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2015-01-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.0 - 1.880 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1672 / 0.1884
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD