Data quality metrics extracted from 5x3p.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5X3P at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL17U
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL17U
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2016-09-09
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data processing
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.8.1_1168)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
32.067 78.038 44.963 90.00 102.67 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
38.240
High resolution limit [Å]
_reflns.d_resolution_high
1.990
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.108
  Rmeas -
Rpim
_reflns.pdbx_Rpim_I_all
0.048
  Total number of observations -
Total number unique
_reflns.number_obs
14643
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
16.20
Completeness [%]
_reflns.percent_possible_obs
99.8
Multiplicity
_reflns.pdbx_redundancy
5.7
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5X3P
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-02-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.2 - 1.999 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1743 / 0.2262
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD