Data quality metrics extracted from 5wpk.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5WPK at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Temperature [K]
_diffrn.ambient_temp
90
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2017-07-30
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.11.1_2575: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
57.865 131.248 57.957 90.00 102.54 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.241
High resolution limit [Å]
_reflns.d_resolution_high
2.300
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.151
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
36792
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.48
Completeness [%]
_reflns.percent_possible_obs
98.2
Multiplicity
_reflns.pdbx_redundancy
3.5
CC(1/2)
_reflns.pdbx_CC_half
0.987

Refinement
PDB entry ID
_entry.id
5WPK
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-08-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.2 - 2.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1771 / 0.2333
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB entry 3QAE