Data quality metrics extracted from 3wmf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3WMF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL41XU
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL41XU
Temperature [K]
_diffrn.ambient_temp
90
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-07-24
Detector
_diffrn_detector.type
RAYONIX MX225HE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0000
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
PHENIX (1.7.3_928)
Refinement
_software.classification
PHENIX (1.7.3_928; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
180.534 180.534 156.097 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.640
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.600 7.050 2.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.072 0.030 0.513
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
30071 1568 1487
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 98.4 98.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
17.0 18.8 10.4
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3WMF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-11-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.9 - 2.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2074 / 0.2457
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS