Data quality metrics extracted from 5wkf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5WKF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-04-22
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.954
Software
Data processing
_software.classification
XDS
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement
_software.classification
BUSTER (2.10.3)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
88.057 146.376 167.557 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95400 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.170 47.170 3.050
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.950 11.430 2.950
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.084 1.345
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
46399 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.20 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 98.6 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.5 7.4 8.7
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.995 0.652

Refinement
PDB entry ID
_entry.id
5WKF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-07-25
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.2 - 2.950 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1900 / 0.2530
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given