Data quality metrics extracted from 5wjf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5WJF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL9-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL9-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2016-02-24
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
2.0
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Model building #1
_software.classification
BUCCANEER
Model building #2
_software.classification
ARP/wARP
Refinement
_software.classification
REFMAC (5.8.0135)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
65.05 67.76 87.99 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
2.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
17.900 17.900 2.550
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.490 11.120 2.490
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.155 0.043 2.357
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.156 0.043 2.388
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
26227 291 1727
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
33.04 130.91 1.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.1 97.7 88.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
70.1 76.3 39.4
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 1.000 0.592

Refinement
PDB entry ID
_entry.id
5WJF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-07-21
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
17.9 - 2.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2218 / 0.2876
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD