Data quality metrics extracted from 8whg.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8WHG at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRF BEAMLINE BL02U1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL02U1
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-09-15
Detector
_diffrn_detector.type
DECTRIS EIGER2 S 9M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979183
Software
Data reduction
_software.classification
XDS (V2023)
Data scaling
_software.classification
XDS (V2023)
Phasing
_software.classification
PHASER (2.7.0)
Refinement
_software.classification
PHENIX (1.20.1_4487)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
335.102 96.071 103.790 90.00 100.48 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97918 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
102.080
High resolution limit [Å]
_reflns.d_resolution_high
2.710
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.140
Rmeas
_reflns.pdbx_Rrim_I_all
0.152
Rpim
_reflns.pdbx_Rpim_I_all
0.060
Total number of observations
_reflns.pdbx_number_measured_all
558118
Total number unique
_reflns.number_obs
87190
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.20
Completeness [%]
_reflns.percent_possible_obs
98.9
Multiplicity
_reflns.pdbx_redundancy
6.4
CC(1/2)
_reflns.pdbx_CC_half
0.985

Refinement
PDB entry ID
_entry.id
8WHG
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2023-09-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
102.1 - 2.710 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2298 / 0.2709
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given