Data quality metrics extracted from 1wdm.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1WDM at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL40B2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL40B2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2004-03-24
Detector
_diffrn_detector.type
ADSC QUANTUM 4
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0000
Software
Data reduction
_software.classification
MOSFLM
Data scaling #1
_software.classification
SCALA
Data scaling #2
_software.classification
CCP4 (SCALA)
Phasing
_software.classification
AMoRE
Refinement
_software.classification
CNS
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
181.453 95.462 161.325 90.00 111.79 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
20.000
High resolution limit [Å]
_reflns.d_resolution_high
3.800
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.124
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
24902
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.90
Completeness [%]
_reflns.percent_possible_obs
98.0
Multiplicity
_reflns.pdbx_redundancy
3.8
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
1WDM
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2004-05-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 3.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2140 / 0.2617
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
form I