Data quality metrics extracted from 3w9w.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3W9W at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
PHOTON FACTORY BEAMLINE BL-17A
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Photon Factory
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL-17A
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2007-02-17
Detector
_diffrn_detector.type
ADSC QUANTUM 270
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data reduction
_software.classification
XDS
Data scaling #1
_software.classification
XSCALE (Wolfgang Kabsch)
Data scaling #2
_software.classification
XDS
Refinement
_software.classification
PHENIX (1.8.2_1309; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
94.27 87.14 88.60 90.00 90.82 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
43.570 43.570 1.430
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.350 4.040 1.350
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.058 0.026 0.385
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 0.031 0.456
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 22013 74395
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
150208 5947 21622
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
16.15 44.86 3.21
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.9 99.2 85.5
  Multiplicity - - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3W9W
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2013-04-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
43.6 - 1.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1484 / 0.1696
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2V3Q