Data quality metrics extracted from 8w2y.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8W2Y at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-10-25
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9774099999999994
Software
Data reduction
_software.classification
xia2 (0.5.653-g9f819c0c-dials-1.11)
Data scaling
_software.classification
xia2 (0.5.653-g9f819c0c-dials-1.11)
Phasing
_software.classification
PHASER (2.8.3)
Refinement
_software.classification
PHENIX (1.21_5207)
General information
Spacegroup name
_symmetry.space_group_name_H-M
H 3 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
44.641 44.641 219.526 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97741 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
36.590 1.790
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.630 1.630
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.067 0.550
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
10874 1943
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
6.77 0.15
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
95.3 81.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.9 2.5
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 0.819

Refinement
PDB entry ID
_entry.id
8W2Y
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-02-21
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
36.6 - 1.630 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2414 / 0.2913
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given