Data quality metrics extracted from 8vw6.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 8VW6 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2023-03-23
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.95374
Software
Data processing
_software.classification
autoPROC (1.0.5)
Data reduction
_software.classification
XDS (20230630)
Data scaling
_software.classification
Aimless (0.7.13)
Phasing
_software.classification
PHASER (2.8.3)
Refinement
_software.classification
BUSTER (2.10.4)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
56.859 81.631 299.150 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95374 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
149.575
High resolution limit [Å]
_reflns.d_resolution_high
2.606
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.589
Rmeas
_reflns.pdbx_Rrim_I_all
0.612
Rpim
_reflns.pdbx_Rpim_I_all
0.166
  Total number of observations -
Total number unique
_reflns.number_obs
16962
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
4.90
Completeness [%]
_reflns.percent_possible_obs
88.9
Multiplicity
_reflns.pdbx_redundancy
13.2
CC(1/2)
_reflns.pdbx_CC_half
0.959

Refinement
PDB entry ID
_entry.id
8VW6
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2024-01-31
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
149.6 - 2.606 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2659 / 0.2778
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given